Tubulin C-terminal Post-translational Modifications Do Not Occur in Wood Forming Tissue of Populus.
Identifieur interne : 001613 ( Main/Exploration ); précédent : 001612; suivant : 001614Tubulin C-terminal Post-translational Modifications Do Not Occur in Wood Forming Tissue of Populus.
Auteurs : Hao Hu [États-Unis] ; Xi Gu [États-Unis] ; Liang-Jiao Xue [États-Unis] ; Prashant S. Swamy [États-Unis] ; Scott A. Harding [États-Unis] ; Chung-Jui Tsai [États-Unis]Source :
- Frontiers in plant science [ 1664-462X ] ; 2016.
Abstract
Cortical microtubules (MTs) are evolutionarily conserved cytoskeletal components with specialized roles in plants, including regulation of cell wall biogenesis. MT functions and dynamics are dictated by the composition of their monomeric subunits, α- (TUA) and β-tubulins (TUB), which in animals and protists are subject to both transcriptional regulation and post-translational modifications (PTM). While spatiotemporal regulation of tubulin gene expression has been reported in plants, whether and to what extent tubulin PTMs occur in these species remain poorly understood. We chose the woody perennial Populus for investigation of tubulin PTMs in this study, with a particular focus on developing xylem where high tubulin transcript levels support MT-dependent secondary cell wall deposition. Mass spectrometry and immunodetection concurred that detyrosination, non-tyrosination and glutamylation were essentially absent in tubulins isolated from wood-forming tissues of P. deltoides and P. tremula ×alba. Label-free quantification of tubulin isotypes and RNA-Seq estimation of tubulin transcript abundance were largely consistent with transcriptional regulation. However, two TUB isotypes were detected at noticeably lower levels than expected based on RNA-Seq transcript abundance in both Populus species. These findings led us to conclude that MT composition during wood formation depends exclusively on transcriptional and, to a lesser extent, translational regulation of tubulin isotypes.
DOI: 10.3389/fpls.2016.01493
PubMed: 27790223
PubMed Central: PMC5061773
Affiliations:
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Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Gu, Xi" sort="Gu, Xi" uniqKey="Gu X" first="Xi" last="Gu">Xi Gu</name><affiliation wicri:level="2"><nlm:affiliation>Institute of Bioinformatics, University of Georgia Athens, GA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute of Bioinformatics, University of Georgia Athens, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Xue, Liang Jiao" sort="Xue, Liang Jiao" uniqKey="Xue L" first="Liang-Jiao" last="Xue">Liang-Jiao Xue</name><affiliation wicri:level="2"><nlm:affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Swamy, Prashant S" sort="Swamy, Prashant S" uniqKey="Swamy P" first="Prashant S" last="Swamy">Prashant S. Swamy</name><affiliation wicri:level="2"><nlm:affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of Georgia Athens, GA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Daniel B. Warnell School of Forestry and Natural Resources, University of Georgia Athens, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Harding, Scott A" sort="Harding, Scott A" uniqKey="Harding S" first="Scott A" last="Harding">Scott A. Harding</name><affiliation wicri:level="2"><nlm:affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Tsai, Chung Jui" sort="Tsai, Chung Jui" uniqKey="Tsai C" first="Chung-Jui" last="Tsai">Chung-Jui Tsai</name><affiliation wicri:level="2"><nlm:affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Cortical microtubules (MTs) are evolutionarily conserved cytoskeletal components with specialized roles in plants, including regulation of cell wall biogenesis. MT functions and dynamics are dictated by the composition of their monomeric subunits, α- (TUA) and β-tubulins (TUB), which in animals and protists are subject to both transcriptional regulation and post-translational modifications (PTM). While spatiotemporal regulation of tubulin gene expression has been reported in plants, whether and to what extent tubulin PTMs occur in these species remain poorly understood. We chose the woody perennial <i>Populus</i> for investigation of tubulin PTMs in this study, with a particular focus on developing xylem where high tubulin transcript levels support MT-dependent secondary cell wall deposition. Mass spectrometry and immunodetection concurred that detyrosination, non-tyrosination and glutamylation were essentially absent in tubulins isolated from wood-forming tissues of <i>P. deltoides</i> and <i>P. tremula</i> ×<i>alba</i>. Label-free quantification of tubulin isotypes and RNA-Seq estimation of tubulin transcript abundance were largely consistent with transcriptional regulation. However, two TUB isotypes were detected at noticeably lower levels than expected based on RNA-Seq transcript abundance in both <i>Populus</i> species. These findings led us to conclude that MT composition during wood formation depends exclusively on transcriptional and, to a lesser extent, translational regulation of tubulin isotypes.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">27790223</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>7</Volume><PubDate><Year>2016</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>Tubulin C-terminal Post-translational Modifications Do Not Occur in Wood Forming Tissue of <i>Populus</i>.</ArticleTitle><Pagination><MedlinePgn>1493</MedlinePgn></Pagination><Abstract><AbstractText>Cortical microtubules (MTs) are evolutionarily conserved cytoskeletal components with specialized roles in plants, including regulation of cell wall biogenesis. MT functions and dynamics are dictated by the composition of their monomeric subunits, α- (TUA) and β-tubulins (TUB), which in animals and protists are subject to both transcriptional regulation and post-translational modifications (PTM). While spatiotemporal regulation of tubulin gene expression has been reported in plants, whether and to what extent tubulin PTMs occur in these species remain poorly understood. We chose the woody perennial <i>Populus</i> for investigation of tubulin PTMs in this study, with a particular focus on developing xylem where high tubulin transcript levels support MT-dependent secondary cell wall deposition. Mass spectrometry and immunodetection concurred that detyrosination, non-tyrosination and glutamylation were essentially absent in tubulins isolated from wood-forming tissues of <i>P. deltoides</i> and <i>P. tremula</i> ×<i>alba</i>. Label-free quantification of tubulin isotypes and RNA-Seq estimation of tubulin transcript abundance were largely consistent with transcriptional regulation. However, two TUB isotypes were detected at noticeably lower levels than expected based on RNA-Seq transcript abundance in both <i>Populus</i> species. These findings led us to conclude that MT composition during wood formation depends exclusively on transcriptional and, to a lesser extent, translational regulation of tubulin isotypes.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Hu</LastName><ForeName>Hao</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gu</LastName><ForeName>Xi</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Institute of Bioinformatics, University of Georgia Athens, GA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xue</LastName><ForeName>Liang-Jiao</ForeName><Initials>LJ</Initials><AffiliationInfo><Affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Swamy</LastName><ForeName>Prashant S</ForeName><Initials>PS</Initials><AffiliationInfo><Affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of Georgia Athens, GA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Harding</LastName><ForeName>Scott A</ForeName><Initials>SA</Initials><AffiliationInfo><Affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tsai</LastName><ForeName>Chung-Jui</ForeName><Initials>CJ</Initials><AffiliationInfo><Affiliation>Daniel B. Warnell School of Forestry and Natural Resources, University of GeorgiaAthens, GA, USA; Department of Genetics, University of GeorgiaAthens, GA, USA; Institute of Bioinformatics, University of GeorgiaAthens, GA, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>10</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">acetylation</Keyword><Keyword MajorTopicYN="N">detyrosination</Keyword><Keyword MajorTopicYN="N">glutamylation</Keyword><Keyword MajorTopicYN="N">microtubules</Keyword><Keyword MajorTopicYN="N">non-tyrosination</Keyword><Keyword MajorTopicYN="N">tension 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Harding</name><name sortKey="Swamy, Prashant S" sort="Swamy, Prashant S" uniqKey="Swamy P" first="Prashant S" last="Swamy">Prashant S. Swamy</name><name sortKey="Tsai, Chung Jui" sort="Tsai, Chung Jui" uniqKey="Tsai C" first="Chung-Jui" last="Tsai">Chung-Jui Tsai</name><name sortKey="Xue, Liang Jiao" sort="Xue, Liang Jiao" uniqKey="Xue L" first="Liang-Jiao" last="Xue">Liang-Jiao Xue</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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